MAST - Submission form

Version 3.5.7	Use this form to submit motifs to MAST to be used in searching a sequence database. Your data will be processed at the San Diego Supercomputer Center and the results will be sent to you via e-mail.

Data Submission Form Required

Your e-mail address:

Re-enter e-mail address:

Your motif file:
Sample DNA motif, right click and "save target as" to download

Sequence database to search--select one of the following:
A MAST database:
or
Your FASTA sequence file (1,000,000 sequence characters maximum):
Sample DNA sequence, right click and "save target as" to download.

Optional

Description of your motifs:
Rank of the first match returned:
Display sequences with E-value below:
Ignore motifs if E-value above:
Use individual sequence composition
in E- and p-value calculation

Scale motif display threshold by sequence length; recommended for nucleotide searches
Text output format
DNA-ONLY OPTIONS Search nucleotide database with protein motifs
Treatment of reverse complement strands:

Please send comments and questions to: meme@nbcr.net.